SynPlot.

Run SynPlot

Background

Instructions

Example Files

References

Links

Homepage

Links to other programs.

Create a multiple alignment:
DIALIGN2.2.1
CHOAS + DIALIGN2.2.1
DIALIGN P (parallel processor version)
GLASS
LAGAN Alignment Toolkit
(M)AVID
SOCKEYE
zPicture

View a global alignment:
SEAVIEW
VISTA
Phylo-VISTA
SEGID
SOCKEYE
zPicture

Other related tools:
ECR Browser
MULAN

Convert the output of RepeatMasker to GFF format:
TransMasker

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