SynPlot.

Run SynPlot

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Instructions

Example Files

References

Links

Homepage

Example files.

SynPlot configuration files.
Default file
SCL locus
LYL1 locus
Global alignments.
SCL locus

Global alignment of human, dog, mouse, rat sequences (in Fasta format). Constructed using LAGAN.

LYL1 locus

Global alignment of human, mouse and dunnart sequences (in Fasta format). Constructed using DIALIGN. Repeat sequences masked with 'N'.

SCL locus annotation (GFF).
LYL1 locus annotation (GFF).
Human
Dog
Mouse
Rat
Human
Mouse
Rat
Dunnart
Output of SynPLot.
SCL locus (Postscript)
SCL locus (PDF)
LYL1 locus (Postscript)
LYL1 locus (PDF)
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